Dr Daniel Noble
Areas of expertise
- Life Histories 060308
- Animal Physiological Ecology 060806
- Behavioural Ecology 060201
- Evolutionary Biology 0603
- Animal Behaviour 060801
- Biostatistics 010402
Research interests
My research is highly integrative combining observational and experimental work with statistical modeling and molecular genetics to address questions in ecophysiology and evolutionary ecology. While I mainly use lizards as model systems for testing theoretical frameworks, I am also working in other systems that lend themselves well to tackling important empirical questions (e.g. crickets, Daphnia, Drosophila).
While my research interests are broad, I am currently exploring questions in four main research areas:
Understanding the covariance between metabolism, behaviour, and life-history
Recent theoretical developments in behavioural ecology suggest that metabolism, personality (i.e. repeatable individual differences in behaviour within and across contexts), learning, and life-history (growth rates, age at maturity, reproductive output) should covary as a result of differences in the “pace-of-life” resulting from different energetic needs of individuals. While we have some support for these ideas there are conceptual and methodological challenges in this area. My group explores how individual metabolic rate influences behaviour, learning and life-history in a short-lived lizard species, the Delicate Skink (Lampropholis delicata).
The role of maternal, environmental and genetic effects on metabolism and life-history
Maternal, environmental and genetic effects interact in complex ways to shape developmental trajectories and thus phenotypic variation. Energy requirements in eukaryotes are driven almost entirely by oxidative phosphorylation (OXPHOS) taking place along the electron transport chain (ETC) of mitochondria. Energy produced by the ETC is critical for cell growth and division and governs the available energy an organism has to allocate to somatic maintenance, growth, and reproduction. We are exploring how mitochondrial gene-environment interactions affect mitochondrial function, whole-organism metabolic rate and life-history using Lampropholis delicata. Using semi-natural mesocosms we are also trying to understand the consequences any changes in metabolic traits have on fitness.
Selection on function-valued traits
Many traits are not simply static features of the individual phenotype but they develop and are influenced by the environment and as such can be viewed as functions. This is a formal way in which we can incorporate phenotypic plasticity and development into evolutionary theory, yet treating traits as being ‘function-valued’ has important statistical and conceptual challenges. Understanding how natural and sexual selection operates on curves and whether genetic variance exists on the parameters estimates describing these curves is thus important in understanding how developmental trajectories evolve. I am interested in developing and applying statistical models to test the utility of the function-valued approach in helping us understand the phenotypic evolution of plastic traits.
Meta-analysis and statistical methods in ecology and evolution
Single studies, while important, are often not enough to garner more general insights into specific hypotheses on there own. My group makes use of meta-analysis to test the general support for specific hypotheses and questions and understand what drives variation in effects across studies in ecology and evolution. With collaborators, we are actively developing new meta-analytic approaches and software that can be used to address a variety of questions an problems encountered in our field.
Biography
I started my career studying evolutionary genetics in mole salamanders in Canada at the University of Guelph. I then received an NSERC postgraduate scholarship to move to Macquarie University to do a Ph.D. where I studied the evolutionary ecology and ecophysiology of alternative reproductive tactics in water skinks (Eulamprus quoyii). I then moved to the University of New South Wales on an ARC Discovery Early Career Award (DECRA) where I delved more deeply into meta-analysis and began to study the Delicate skink, along with Zebrafish; exploring how early developmental environments impact metabolism, behaviour, learning and life-history.
Available student projects
Past student projects
Fonti Kar – PhD 2016 – 2020 – University of New South Wales – Co-advised with A/Prof. Shinichi Nakagawa – Phenotypic plasticity and pace-of-life in a widespread lizard, Lampropholis delicata
Birgit Szabo – PhD 2016 – 2019 – Macquarie University – Co-advised with Dr. Martin Whiting – Comparative cognition accross in lizards with diverse social structure
Kirke Munch – PhD 2014-2018- University of Tasmania – Co-advised with Dr. Geoff While – Sociality, personality and learning in a family living lizard, Egernia whitii
Publications
- Noble, D, Kar, F, Nakagawa, S et al. 2021, 'Sexual selection on performance traits in an Australian lizard with alternative reproductive tactics', Journal of Evolutionary Biology, vol. 34, pp. 451-464.
- Yang, Y, Lagisz, M, Foo, Y et al. 2021, 'Beneficial intergenerational effects of exercise on brain and cognition: a multilevel meta-analysis of mean and variance', Biological Reviews, vol. 96, no. 4, pp. 1504-1527.
- Anwar, H, Mason, D, Zajitschek, S et al. 2021, 'An efficient new assay for measuring zebrafish anxiety: Tall tanks that better characterize between-individual differences', Journal of Neuroscience Methods, vol. 356, pp. 11pp.
- Rodgers, E, Franklin, C & Noble, D 2021, 'Diving in hot water: a meta-analytic review of how diving vertebrate ectotherms will fare in a warmer world', Journal of Experimental Biology, vol. 224, pp. 12pp.
- Koch, R, Buchanan, K, Casagrande, S et al. 2021, 'Integrating Mitochondrial Aerobic Metabolism into Ecology and Evolution', Trends in Ecology and Evolution, vol. 36, no. 4, pp. 321-332.
- Nakagawa, S, Lagisz, M, O'Dea, R et al. 2021, 'The orchard plot: Cultivating a forest plot for use in ecology, evolution, and beyond ', Research Synthesis Methods, vol. 12, no. 1, pp. 4-12.
- Kar, F, Nakagawa, S, Friesen, C et al. 2021, 'Individual variation in thermal plasticity and its impact on mass-scaling', Oikos, vol. 130, no. 7, pp. 1131-1142.
- O'Dea, R, Lagisz, M, Jennions, M et al. 2021, 'Preferred reporting items for systematic reviews and meta�analyses in ecology and evolutionary biology: a PRISMA extension', Biological Reviews, vol. 96, no. 5, pp. 1695-1722.
- Noble, D & Nakagawa, S 2021, 'Planned missing data designs and methods: options for strengthening inference, increasing research efficiency and improving animal welfare in ecological and evolutionary research', Evolutionary Applications, vol. 14, pp. 1958-1968.
- Szabo, B, Noble, D & Whiting, M 2021, 'Learning in non-avian reptiles 40 years on: advances and promising new directions', Biological Reviews, vol. 96, pp. 331-356.
- Garcia-Roa, R, Garcia-Gonzalez, F, Noble, D et al. 2020, 'Temperature as a modulator of sexual selection', Biological Reviews, vol. 95, no. 6, pp. 1607-1629.
- Zajitschek, S, Zajitschek, F, Bonduriansky, R et al. 2020, 'Sexual dimorphism in trait variability and its eco-evolutionary and statistical implications', eLife, vol. 9, pp. 1-17.
- Nakagawa, S, Dunn, A, Lagisz, M et al 2020, 'A new ecosystem for evidence synthesis', Nature Ecology & Evolution, vol. 4, pp. 498-501.
- Radersma, R, Noble, D & Uller, T 2020, 'Plasticity leaves a phenotypic signature during local adaptation', Evolution Letters, vol. 4, no. 4, pp. 360-370.
- Friesen, C, Noble, D & Olsson, M 2020, 'The role of oxidative stress in postcopulatory selection', Philosophical Transactions of the Royal Society of London Series B, vol. 375, no. 1813, pp. 1-9.
- Sanchez-Tojar, A, Lagisz, M, Moran, N et al. 2020, 'The jury is still out regarding the generality of adaptive transgenerational effects', Ecology Letters, vol. 23, no. 11, pp. 1715-1718.
- Noble, D, Radersma, R & Uller, T 2019, 'Plastic responses to novel environments are biased towards phenotype dimensions with high additive genetic variation', PNAS - Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 27, pp. 13452-13461.
- Szabo, B, Noble, D, Byrne, R et al. 2019, 'Precocial juvenile lizards show adult level learning and behavioural flexibility', Animal Behaviour, vol. 154, pp. 75-84.
- Szabo, B, Whiting, M & Noble, D 2019, 'Sex-dependent discrimination learning in lizards: A meta-analysis', Behavioural Processes, vol. 164, pp. 10-16.
- Nakagawa, S, Samarasinghe, G, Haddaway, N et al 2019, 'Research Weaving: Visualizing the Future of Research Synthesis', Trends in Ecology and Evolution, vol. 34, no. 3, pp. 224-238.
- Szabo, B, Noble, D & Whiting, M 2019, 'Context-specific response inhibition and differential impact of a learning bias in a lizard', Animal Cognition, vol. Published online: 1 Feb 2019, pp. 1-13.
- Pick, J, Nakagawa, S & Noble, D 2019, 'Reproducible, flexible and high-throughput data extraction from primary literature: The metaDigitise r package', Methods in Ecology and Evolution, vol. 10, pp. 426-431.
- Munch, K, Noble, D, Budd, L et al 2018, 'Maternal presence facilitates plasticity in offspring behavior: insights into the evolution of parental care', Behavioral Ecology, vol. 29, no. 6, pp. 1298-1306pp.
- Whiting, M, Xu, F, Kar, F et al 2018, 'Evidence for Social Learning in a Family Living Lizard', Frontiers in Ecology and Evolution, vol. 6, no. 70, pp. 1-8pp.
- Fangmeier, M, Noble, D, O'Dea, R et al 2018, 'Computer Animation Technology in Behavioral Sciences: A Sequential, Automatic, and High-Throughput Approach to Quantifying Personality in Zebrafish', Zebrafish, vol. 15, no. 2, pp. 206-210pp.
- Munch, K, Noble, D, Botterill-James, T et al. 2018, 'Maternal effects impact decision-making in a viviparous lizard', Biology Letters, vol. 14, no. 4, pp. 1-4pp.
- Tarka, M, Guenther, A, Niemelä, P et al 2018, 'Sex differences in life history, behavior, and physiology along a slow-fast continuum: a meta-analysis', Behavioral Ecology and Sociobiology, vol. 72, no. 132, pp. 13pp.
- Munch, K, Noble, D, Wapstra, E et al 2018, 'Mate familiarity and social learning in a monogamous lizard', Oecologia, vol. 188, pp. 1-10pp.
- Riley, J, Guidou, C, Fryns, C et al 2018, 'Isolation rearing does not constrain social plasticity in a family-living lizard', Behavioral Ecology, vol. 29, no. 3, pp. 563-573pp.
- While, G, Noble, D, Uller, T et al 2018, 'Patterns of developmental plasticity in response to incubation temperature in reptiles', Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, vol. 329, no. 4-5, pp. 162-176.
- Qi, Y, Noble, D, Fu, J et al 2018, 'Testing domain general learning in an Australian lizard', Animal Cognition, vol. 21, no. 4, pp. 595-602.
- Noble, D, Stenhouse, V, Riley, J et al 2018, 'Data Descriptor: A comprehensive database of thermal developmental plasticity in reptiles', Scientific Data, vol. 5, no. 180138, pp. -.
- Szabo, B, Noble, D, Byrne, R et al. 2018, 'Subproblem learning and reversal of a multidimensional visual cue in a lizard: evidence for behavioural flexibility?', Animal Behaviour, vol. 144, pp. 17-26pp.
- Radersma, R, Hegg, A, Noble, D et al 2018, 'Timing of maternal exposure to toxic cyanobacteria and offspring fitness in Daphnia magna: Implications for the evolution of anticipatory maternal effects', Ecology and Evolution, vol. 8, no. 24, pp. 12727-12736pp.
- Noble, D, Stenhouse, V & Schwanz, L 2018, 'Developmental temperatures and phenotypic plasticity in reptiles: a systematic review and meta-analysis', Biological Reviews, vol. 93, no. 1, pp. 72-97.
- Usui, T, Noble, D, O'Dea, R et al 2018, 'The French press: A repeatable and high-throughput approach to exercising zebrafish (Danio rerio)', PeerJ, vol. 6, no. 4292, pp. 12pp.
- Riley, J, Kachler, A, Damasio, T et al 2018, 'Learning ability is unaffected by isolation rearing in a family-living lizard', Behavioral Ecology and Sociobiology, vol. 72, no. 20, pp. 9pp.
- Cordero, G, Andersson, B, Souchet, J et al 2017, 'Physiological plasticity in lizard embryos exposed to high-altitude hypoxia', Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, vol. 327, no. 7, pp. 423-432pp.
- Kar, F, Whiting, M & Noble, D 2017, 'Dominance and social information use in a lizard', Animal Cognition, vol. 20, no. 5, pp. 805-812.
- Riley, J, Noble, D, Byrne, R et al 2017, 'Does social environment influence learning ability in a family-living lizard?', Animal Cognition, vol. 20, no. 3, pp. 449-458pp.
- Nakagawa, S, Noble, D, Senior, A et al 2017, 'Meta-evaluation of meta-analysis: Ten appraisal questions for biologists', BMC Biology, vol. 15, no. 18, pp. 14pp.
- Noble, D, Lagisz, M, O'Dea, R et al 2017, 'Nonindependence and sensitivity analyses in ecological and evolutionary meta-analyses', Molecular Ecology, vol. 26, pp. 2410-2425pp.
- Senior, A, Nakagawa, S, Raubenheimer, D et al. 2017, 'Dietary restriction increases variability in longevity', Biology Letters, vol. 13, no. 3, pp. 4pp.
- Riley, J, Noble, D, Byrne, R et al 2017, 'Early social environment influences the behaviour of a family-living lizard', Royal Society Open Science, vol. 4, no. 5, pp. 1-16pp.
- Kar, F, Whiting, M & Noble, D 2016, 'Influence of prior contest experience and level of escalation on contest outcome', Behavioral Ecology and Sociobiology, vol. 70, no. 10, pp. 1679-1687.
- O'Dea, R, Noble, D, Johnson, S et al 2016, 'The role of non-genetic inheritance in evolutionary rescue: epigenetic buffering, heritable bet hedging and epigenetic traps', Environmental Epigenetics, vol. 2, no. 1, pp. 1-12pp.
- White, T, Dalrymple, R, Noble, D et al. 2015, 'Reproducible research in the study of biological coloration', Animal Behaviour, vol. 106, pp. 51-57.
- Whiting, M, Noble, D & Somaweera, R 2015, 'Sexual dimorphism in conspicuousness and ornamentation in the enigmatic leaf-nosed lizard Ceratophora tennentii from Sri Lanka', Biological Journal of the Linnean Society, vol. 116, no. 3, pp. 614-625.
- Clark, B, Amiel, J, Shine, R et al 2014, 'Colour discrimination and associative learning in hatchling lizards incubated at 'hot' and 'cold' temperatures', Behavioral Ecology and Sociobiology, vol. 68, no. 2, pp. 239-247.
- Carazo, P, Noble, D, Chandrasoma, D et al 2014, 'Sex and boldness explain individual differences in spatial learning in a lizard', Proceedings of the Royal Society of London Series B: Biological Sciences, vol. 281, no. 1782, pp. -.
- Noble, D, Fanson, K & Whiting, M 2014, 'Sex, androgens, and whole-organism performance in an Australian lizard', Biological Journal of the Linnean Society, vol. 111, no. 4, pp. 834-849.
- Noble, D, Byrne, R & Whiting, M 2014, 'Age-dependent social learning in a lizard', Biology Letters, vol. 10, no. 7, pp. -.
- Qi, Y, Noble, D, Wu, Y et al 2014, 'Sex- and performance-based escape behaviour in an Asian agamid lizard, Phrynocephalus vlangalii', Behavioral Ecology and Sociobiology, vol. 68, no. 12, pp. 2035-2042.
- Noble, D, McFarlane, S, Keogh, S et al. 2014, 'Maternal and additive genetic effects contribute to variation in offspring traits in a lizard ', Behavioral Ecology, vol. 25, no. 3, pp. 633-640pp.
- Noble, D, Wechmann, K, Keogh, S et al. 2013, 'Behavioral and morphological traits interact to promote the evolution of alternative reproductive tactics in a lizard', The American Naturalist, vol. 182, no. 6, pp. 726-742.
- Noble, D, Keogh, S & Whiting, M 2013, 'Multiple mating in a lizard increases fecundity but provides no evidence for genetic benefits', Behavioral Ecology, vol. 24, no. 5, pp. 1128-1137.
Projects and Grants
Grants information is drawn from ARIES. To add or update Projects or Grants information please contact your College Research Office.
- Maternal contributions to offspring development in a changing climate (Primary Investigator)
- Expanding the metaverse; an R ecosystem for meta-research (Secondary Investigator)
- Early environmental effects on phenotypic development and evolution (Primary Investigator)