Professor Simon Foote
Areas of expertise
- Genetics 0604
- Medical Microbiology 1108
- Medical Parasitology 110803
Research interests
Our laboratory is interested in the genetic control of susceptibility to disease, with particular focus on infectious disease. We have identified loci governing the response to leishmaniasis and malaria. However the major focus of the laboratory is on trying to identify new drugs to combat malaria. By using the example of natural mutations that affect the red cell and making it difficult for the parasite to grow, we have found genes, that when mutated, prevent growth of malarial parasites. These genetic changes point the way to the creation of a new type of treatment that will be steadfast against the development of drug resistance.
Our laboratory is also interested in the genetic susceptibility to other diseases of humans. We are currently working on investigating the reasons that renal disease is so common in Aboriginal communities.
Biography
Simon Foote is a medical graduate from Melbourne University. He practiced medicine until 1989. He completed his PhD at the Walter and Eliza Hall Institute in 1989 in the genetics of malarial drug resistance. He spent 5 years at the Whitehead Institute at MIT studying the human genome. He generated several physical maps of part and/all of the human genome. Upon his return to Australia he was first a laboratory head, then joint head of the Genetics and Bioinformatics division with Terry Speed at the WEHI. With John Mattick, he set up the Australian Genome Research Facility in 1997. He became director of the Menzies Research Institute, Tasmania in 2005, Dean of the Medical School at Macquarie University in 2012 and Director of the John Curtin School of Medical Research at ANU in 2014.
Simon Foote was elected to the Australian Academy of Science in 2016, and was a founding member of Australian Academy of Health and Medical Sciences (AAHMS), elected to the Academy in 2014, and is also a Council Member of the AAHMS. Simon Foote was elected as a Fellow of the Australian Academy of Technological Sciences and Engineering (ATSE) in 2009.
Publications
- Smith, C, Jerkovic, A, Truong, T et al 2017, 'Griseofulvin impairs intraerythrocytic growth of Plasmodium falciparum through ferrochelatase inhibition but lacks activity in an experimental human infection study.', Scientific Reports, vol. 7, pp. 41975-41975.
- Foote, S, Burgio, G & McMorran, B 2017, 'Platelets in Malarial Infection: Protective or Pathological?', in P. Gresele, Neal S. Kleiman, Jose A Lopez, Clive P Page (ed.), Platelets in Thrombotic and Non-Thrombotic Disorders, Springer International Publishing AG, Switzerland, pp. 1103-1109pp.
- Huang, H, Bauer, D, Lelliott, P et al 2017, 'Ankyrin-1 gene exhibits allelic heterogeneity in conferring protection against Malaria', https://www.ncbi.nlm.nih.gov/pubmed/28751503.
- Binder, M, Fox, A, Merio, D et al. 2016, 'Common and Low Frequency Variants in MERTK Are Independently Associated with Multiple Sclerosis Susceptibility with Discordant Association Dependent upon HLA-DRB1*15:01 Status', PLoS Genetics, vol. 12, no. 3, pp. e1005853-e1005853.
- Zhou, Y, Zhu, G, Charlesworth, J et al 2016, 'Genetic loci for Epstein-Barr virus nuclear antigen-1 are associated with risk of multiple sclerosis', Multiple Sclerosis, vol. 22, no. 13, pp. 1655-1664.
- Hortle, E, Nijagal, B, Bauer, D et al 2016, 'Adenosine monophosphate deaminase 3 activation shortens erythrocyte half-life and provides malaria resistance in mice', https://www.ncbi.nlm.nih.gov/pubmed/27465915.
- Huang, H, Bauer, D, Lelliott, P et al 2016, 'A novel ENU-induced ankyrin-1 mutation impairs parasite invasion and increases erythrocyte clearance during malaria infection in mice', https://www.ncbi.nlm.nih.gov/pubmed/27848995.
- Vinogradov, E, Nash, J, Foote, S et al 2015, 'The structure of the Morganella morganii lipopolysaccharide core region and identification of its genomic loci', Carbohydrate Research, vol. 402, pp. 232-235.
- Blackburn, N, Charlesworth, J, Marthick, J et al. 2015, 'A retrospective examination of mean relative telomere length in the Tasmanian Familial Hematological Malignancies Study', Oncology Reports, vol. 33, no. 1, pp. 25-32.
- Zabeau, L, Jensen, C, Seeuws, S et al 2015, 'Leptin's metabolic and immune functions can be uncoupled at the ligand/receptor interaction level', Cellular and Molecular Life Sciences, vol. 72, no. 3, pp. 629-644.
- Bauer, D, McMorran, B, Foote, S et al 2015, 'Genome-wide analysis of chemically induced mutations in mouse in phenotype-driven screens', http://www.ncbi.nlm.nih.gov/pubmed/26503232
- Dogovski, C, Xie, S, Burgio, G et al 2015, 'Targeting the Cell Stress Response of Plasmodium falciparum to Overcome Artemisinin Resistance' http://www.ncbi.nlm.nih.gov/pubmed/25901609
- Lelliott, P, McMorran, B, Foote, S et al 2015, 'Erythrocytic iron deficiency enhances susceptibility to Plasmodium chabaudi infection in mice carrying a missense mutation in transferrin receptor 1', http://www.ncbi.nlm.nih.gov/pubmed/26303393
- Lelliott, P, McMorran, B, Foote, S et al 2015, 'In vivo assessment of rodent Plasmodium parasitemia and merozoite invasion by flow cytometry', http://www.ncbi.nlm.nih.gov/pubmed/25867202
- Lelliott, P, McMorran, B, Foote, S et al 2015, 'The influence of host genetics on erythrocytes and malaria infection: Is there therapeutic potential?', http://www.ncbi.nlm.nih.gov/pubmed/26215182
- Smith, C, Jerkovic, A, Puy, H et al 2015, 'Red cells from ferrochelatase-deficient erythropoietic protoporphyria patients are resistant to growth of malarial parasites' http://www.ncbi.nlm.nih.gov/pubmed/25414439
- Strong, P, Fulton, K, Aubry, A et al. 2014, 'Identification and characterization of glycoproteins on the spore surface of Clostridium difficile', Journal of Bacteriology, vol. 196, no. 14, pp. 2627-2637.
- Brizuela, M, Huang, H, Smith, C et al 2014, 'Treatment of erythrocytes with the 2-Cys peroxiredoxin inhibitor, conoidin A, prevents the growth of Plasmodium falciparum and enhances parasite sensitivity to chloroquine', http://www.ncbi.nlm.nih.gov/pubmed/24699133
- Lelliott, P, Lampkin, S, McMorran, B et al 2014, 'A flow cytometric assay to quantify invasion of red blood cells by rodent Plasmodium parasites in vivo', http://www.ncbi.nlm.nih.gov/pubmed/24628989
- McMorran, B, Burgio, G & Foote, S 2013, 'New insights into the protective power of platelets in malaria infection' http://www.ncbi.nlm.nih.gov/pubmed/23710276
- Klein, K, O'Brien, T, Praveen, K et al 2012, 'Familial focal epilepsy with variable foci mapped to chromosome 22q12: Expansion of the phenotypic spectrum', Epilepsia, vol. 53, no. 8, pp. e151-e155.
- Greth, A, Lampkin, S, Mayura-Guru, P et al 2012, 'A novel ENU-mutation in ankyrin-1 disrupts malaria parasite maturation in red blood cells and mice' http://www.ncbi.nlm.nih.gov/pubmed/22723917
- McMorran, B, Wieczorski, L, Drysdale, K et al 2012, 'Platelet factor 4 and duffy antigen required for platelet killing of Plasmodium falciparum' http://www.ncbi.nlm.nih.gov/pubmed/23224555
- Ma, G, Stankovich, J, Kilpatrick, T et al 2011, 'Polymorphisms in the receptor tyrosine kinase MERTK gene are associated with Multiple Sclerosis susceptibility', PLOS ONE (Public Library of Science), vol. 6, no. 2, pp. e16964-e16964.
- Tegg, E, Thomson, R, Stankovitch, J et al 2011, 'Anticipation in familial hematologic malignancies', Blood, vol. 117, no. 4, pp. 1308-1310.
- Nawijn, M, Piavaux, B, Jeurink, P et al 2011, 'Identification of the Mhc region as an Asthma Susceptibility Locus in Recombinant Congenic Mice', American Journal of Respiratory Cell and Molecular Biology, vol. 45, no. 2, pp. 295-303pp.
- Van der Walt, A, Stankovich, J, Bahlo, M et al 2011, 'Heterogeneity at the HLA-DRB1 allelic variation locus does not influence multiple sclerosis disease severity, brain atrophy or cognition', Multiple Sclerosis, vol. 17, no. 3, pp. 344-352pp.
- Wang, J, Pappas, D, De Jager, P et al 2011, 'Modeling the cumulative genetic risk for multiple sclerosis from genome-wide association data', Genome Medicine, vol. 3, no. 3.
- Patsopoulos, N, Esposito, F, Reischl, J et al 2011, 'Genome-wide Meta-Analysis Identifies Novel Multiple Sclerosis Susceptibility Loci', Annals of Neurology, vol. 70, no. 6, pp. 897-912.
- Ritchie, M, Liu, R, Carvalho, B et al 2011, 'Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips', BMC Bioinformatics, vol. 12, no. 68, pp. (12 pp).
- O'Gorman, C, Freeman, S, Taylor, B et al 2011, 'Familial recurrence risks for multiple sclerosis in Australia', Journal of Neurology Neurosurgery and Psychiatry, vol. 82, no. 12, pp. 1351-1354.
- Longley, R, Smith, C, Fortin, A et al 2010, 'Host resistance to malaria: Using mouse models to explore the host response' http://www.ncbi.nlm.nih.gov/pubmed/21116636
- Field, J, Browning, S, Johnson, L et al 2010, 'A polymorphism in the HLA-DPB1 gene is associated with susceptibility to multiple sclerosis', PLOS ONE (Public Library of Science), vol. 5, no. 10, pp. 7pp.
- Tegg, E, Thomson, R, Stankovich, J et al 2010, 'Evidence for a common genetic aetiology in high-risk families with multiple haematological malignancy subtypes', British Journal of Haematology, vol. 150, no. 4, pp. 456-462.
- Jensen, C, Stankovich, J, Van der Walt, A et al 2010, 'Multiple sclerosis susceptibility-associated SNPs do not influence disease severity measures in a cohort of Australian MS patients', PLOS ONE (Public Library of Science), vol. 5, no. 3, pp. 7pp.
- Sakthianandeswaren, A, Curtis, J, Elso, C et al 2010, 'Fine mapping of Leishmania major susceptibility locus lmr2 and evidence of a role for Fli1 in disease and wound healing', Infection and Immunity, vol. 78, no. 6, pp. 2734-2744.
- Sakthianandeswaren, A, Foote, S & Handman, E 2009, 'The role of host genetics in leishmaniasis', Trends in Parasitology, vol. 25, no. 8, pp. 383-391.
- McMorran, B, Marshall, V, de Graaf, C et al 2009, 'Platelets kill intraerythrocytic malarial parasites and mediate survival to infection', Science, vol. 323, no. 5915, pp. 797-800.
- Bahlo, M, Booth, D, Broadley, S et al 2009, 'Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20', Nature Genetics, vol. 41, no. 7, pp. 824-828.